STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF146Ring finger protein 146. (387 aa)    
Predicted Functional Partners:
LOC101070151
Poly [ADP-ribose] polymerase.
    
 0.889
LOC101061340
Poly [ADP-ribose] polymerase.
    
 0.889
parp1
Poly [ADP-ribose] polymerase.
    
 
 0.685
parp2
Poly [ADP-ribose] polymerase.
    
 
 0.666
trip12
Thyroid hormone receptor interactor 12.
      
 0.655
ENSTRUP00000017762
Ankyrin repeat and death domain containing 1B.
    
 0.650
ANK2
Ankyrin 2b, neuronal.
    
 0.650
LOC101067381
Ankyrin 3a.
    
 0.650
LOC101069396
ANK_REP_REGION domain-containing protein.
    
 0.650
ankrd52
Ankyrin repeat domain 52a.
    
 0.650
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.