Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
selenotSelenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily. (135 aa)    
Predicted Functional Partners:
selenof
Selenoprotein F.
   
  
 0.755
selenok
Selenoprotein K.
      
 0.701
LOC101070319
Selenoprotein M.
      
 0.659
MSRB1
Methionine sulfoxide reductase B1a.
      
 0.641
txnrd2
Thioredoxin reductase 2, tandem duplicate 1.
   
  
 0.637
selenoh
Uncharacterized protein.
      
 0.615
selenoi
Selenoprotein I; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.596
mien1
Selenoprotein W, 2b.
      
 0.567
LOC101068545
Thioredoxin reductase 3.
   
  
 0.564
selenoo
Selenoprotein O1.
      
 0.546
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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