pik3r5 protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

pik3r5

Phosphoinositide-3-kinase, regulatory subunit 5. (886 aa)

Predicted Functional Partners:

pik3cg

0.997

H2S720_TAKRU

0.997

GNG4

0.935

gng2

0.935

PIK3CA

0.920

pik3r6

0.920

LOC101067191

0.920

pik3cb

0.920

pik3cd

0.920

ENSTRUP00000078829

0.920

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000078829	GNG4	ENSTRUP00000078829	ENSTRUP00000063062	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.	0.438
ENSTRUP00000078829	H2S720_TAKRU	ENSTRUP00000078829	ENSTRUP00000075024	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	0.756
ENSTRUP00000078829	LOC101067191	ENSTRUP00000078829	ENSTRUP00000016050	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.544
ENSTRUP00000078829	PIK3CA	ENSTRUP00000078829	ENSTRUP00000009530	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.544
ENSTRUP00000078829	gng2	ENSTRUP00000078829	ENSTRUP00000076429	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.438
ENSTRUP00000078829	pik3cb	ENSTRUP00000078829	ENSTRUP00000017655	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.572
ENSTRUP00000078829	pik3cd	ENSTRUP00000078829	ENSTRUP00000054260	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.599
ENSTRUP00000078829	pik3cg	ENSTRUP00000078829	ENSTRUP00000029189	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.746
ENSTRUP00000078829	pik3r5	ENSTRUP00000078829	ENSTRUP00000009990	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Phosphoinositide-3-kinase, regulatory subunit 5.	0.920
ENSTRUP00000078829	pik3r6	ENSTRUP00000078829	ENSTRUP00000009667	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.682
GNG4	ENSTRUP00000078829	ENSTRUP00000063062	ENSTRUP00000078829	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.438
GNG4	H2S720_TAKRU	ENSTRUP00000063062	ENSTRUP00000075024	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	0.874
GNG4	LOC101067191	ENSTRUP00000063062	ENSTRUP00000016050	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.438
GNG4	PIK3CA	ENSTRUP00000063062	ENSTRUP00000009530	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.438
GNG4	pik3cb	ENSTRUP00000063062	ENSTRUP00000017655	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.438
GNG4	pik3cd	ENSTRUP00000063062	ENSTRUP00000054260	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.438
GNG4	pik3cg	ENSTRUP00000063062	ENSTRUP00000029189	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.874
GNG4	pik3r5	ENSTRUP00000063062	ENSTRUP00000009990	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.	Phosphoinositide-3-kinase, regulatory subunit 5.	0.935
GNG4	pik3r6	ENSTRUP00000063062	ENSTRUP00000009667	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.	Uncharacterized protein.	0.669
H2S720_TAKRU	ENSTRUP00000078829	ENSTRUP00000075024	ENSTRUP00000078829	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.756