tsen54 protein (Takifugu rubripes) - STRING interaction network

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Score

tsen54

TSEN54 tRNA splicing endonuclease subunit. (382 aa)

Predicted Functional Partners:

tsen15

0.997

LOC101072894

0.995

clp1

0.991

tsen2

0.989

ENSTRUP00000077645

0.989

rars2

0.794

arfgap2

0.697

arfgap3

0.697

LOC101066313

0.670

cpsf1

0.665

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000077645	LOC101066313	ENSTRUP00000077645	ENSTRUP00000058027	TRNA-splicing endonuclease subunit Sen2-like isoform X1.	Exosome component 3.	0.400
ENSTRUP00000077645	LOC101072894	ENSTRUP00000077645	ENSTRUP00000078235	TRNA-splicing endonuclease subunit Sen2-like isoform X1.	tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]	0.985
ENSTRUP00000077645	clp1	ENSTRUP00000077645	ENSTRUP00000031904	TRNA-splicing endonuclease subunit Sen2-like isoform X1.	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	0.965
ENSTRUP00000077645	cpsf1	ENSTRUP00000077645	ENSTRUP00000033408	TRNA-splicing endonuclease subunit Sen2-like isoform X1.	Cleavage and polyadenylation specific factor 1.	0.500
ENSTRUP00000077645	rars2	ENSTRUP00000077645	ENSTRUP00000045604	TRNA-splicing endonuclease subunit Sen2-like isoform X1.	Arginyl-tRNA synthetase 2, mitochondrial (putative); Belongs to the class-I aminoacyl-tRNA synthetase family.	0.546
ENSTRUP00000077645	tsen15	ENSTRUP00000077645	ENSTRUP00000055013	TRNA-splicing endonuclease subunit Sen2-like isoform X1.	TSEN15 tRNA splicing endonuclease subunit.	0.978
ENSTRUP00000077645	tsen2	ENSTRUP00000077645	ENSTRUP00000058746	TRNA-splicing endonuclease subunit Sen2-like isoform X1.	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	0.542
ENSTRUP00000077645	tsen54	ENSTRUP00000077645	ENSTRUP00000010020	TRNA-splicing endonuclease subunit Sen2-like isoform X1.	TSEN54 tRNA splicing endonuclease subunit.	0.989
LOC101066313	ENSTRUP00000077645	ENSTRUP00000058027	ENSTRUP00000077645	Exosome component 3.	TRNA-splicing endonuclease subunit Sen2-like isoform X1.	0.400
LOC101066313	rars2	ENSTRUP00000058027	ENSTRUP00000045604	Exosome component 3.	Arginyl-tRNA synthetase 2, mitochondrial (putative); Belongs to the class-I aminoacyl-tRNA synthetase family.	0.433
LOC101066313	tsen2	ENSTRUP00000058027	ENSTRUP00000058746	Exosome component 3.	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	0.400
LOC101066313	tsen54	ENSTRUP00000058027	ENSTRUP00000010020	Exosome component 3.	TSEN54 tRNA splicing endonuclease subunit.	0.670
LOC101072894	ENSTRUP00000077645	ENSTRUP00000078235	ENSTRUP00000077645	tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]	TRNA-splicing endonuclease subunit Sen2-like isoform X1.	0.985
LOC101072894	clp1	ENSTRUP00000078235	ENSTRUP00000031904	tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]	Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...]	0.982
LOC101072894	cpsf1	ENSTRUP00000078235	ENSTRUP00000033408	tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]	Cleavage and polyadenylation specific factor 1.	0.534
LOC101072894	rars2	ENSTRUP00000078235	ENSTRUP00000045604	tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]	Arginyl-tRNA synthetase 2, mitochondrial (putative); Belongs to the class-I aminoacyl-tRNA synthetase family.	0.642
LOC101072894	tsen15	ENSTRUP00000078235	ENSTRUP00000055013	tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]	TSEN15 tRNA splicing endonuclease subunit.	0.997
LOC101072894	tsen2	ENSTRUP00000078235	ENSTRUP00000058746	tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]	tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]	0.985
LOC101072894	tsen54	ENSTRUP00000078235	ENSTRUP00000010020	tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]	TSEN54 tRNA splicing endonuclease subunit.	0.995
arfgap2	tsen54	ENSTRUP00000020134	ENSTRUP00000010020	ADP-ribosylation factor GTPase activating protein 2.	TSEN54 tRNA splicing endonuclease subunit.	0.697