Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101073257Prickle homolog 2a. (893 aa)    
Predicted Functional Partners:
VANGL1
Vang-like protein.
    
 0.987
dvl2
Dishevelled segment polarity protein 2.
    
 0.984
LOC101068730
VANGL planar cell polarity protein 2.
    
 0.983
vangl2
Vang-like protein.
    
 0.983
dvl1
Dishevelled segment polarity protein 1a.
    
 0.976
dvl3
Dishevelled segment polarity protein 3a.
    
 0.971
LOC101070874
Vang-like protein.
    
 0.942
ankrd6
Ankyrin repeat domain-containing protein 6.
    
 0.915
ENSTRUP00000057963
annotation not available
    
 0.725
nap1l1
Nucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.719
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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