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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sptbn4Spectrin beta chain; Belongs to the spectrin family. (2444 aa)    
Predicted Functional Partners:
sptan1
Uncharacterized protein.
   
0.916
ANK2
Ankyrin 2b, neuronal.
   
 0.686
LOC101067381
Ankyrin 3a.
   
 0.686
ank1
Ankyrin 1, erythrocytic a.
   
 0.686
ENSTRUP00000083487
Uncharacterized protein.
   
 0.686
ENSTRUP00000017762
Ankyrin repeat and death domain containing 1B.
   
 0.675
LOC101077791
Uncharacterized protein.
     
 0.643
LOC101070151
Poly [ADP-ribose] polymerase.
   
 0.600
LOC101061340
Poly [ADP-ribose] polymerase.
   
 0.600
LOC101069396
ANK_REP_REGION domain-containing protein.
   
 0.600
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.