Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zbtb11Zinc finger and BTB domain containing 11. (1161 aa)    
Predicted Functional Partners:
rpf1
Ribosome production factor 1 homolog.
   
   0.880
zcrb1
Zinc finger CCHC-type and RNA binding motif 1.
    
   0.717
rpl31
Ribosomal protein L31.
    
   0.624
ankrd27
Ankyrin repeat domain 27 (VPS9 domain).
    
 0.585
LOC101069574
Ribosomal protein L10.
    
   0.573
LOC101067942
Ribosomal protein L26.
    
   0.573
denr
Density-regulated protein; Belongs to the DENR family.
      
 0.559
snapc1
Small nuclear RNA activating complex, polypeptide 1b.
    
 0.525
LOC101072938
Uncharacterized protein.
    
 0.525
LOC101064250
Odorant receptor 131-2.
    
 0.499
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.