Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101075683Kelch-like family member 43. (691 aa)    
Predicted Functional Partners:
bbs9
Bardet-Biedl syndrome 9.
    
 0.485
ubxn7
UBX domain protein 7.
    
  0.484
UBXN7
UBX domain protein 7.
    
  0.484
ttc8
Tetratricopeptide repeat domain 8.
    
 0.456
LOC101078126
Kelch-like family member 40a.
  
   
0.450
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
  0.421
nfe2l2
Nuclear factor, erythroid 2-like 2a.
    
 0.416
cul3
Cullin 3a; Belongs to the cullin family.
    
 0.410
cacul1
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.410
nfe2
Nuclear factor, erythroid 2.
    
 0.409
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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