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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ei24EI24 autophagy associated transmembrane protein. (340 aa)    
Predicted Functional Partners:
TP53I3
Tumor protein p53 inducible protein 3.
     
 0.903
epg5
Ectopic P-granules autophagy protein 5 homolog (C. elegans).
      
 0.603
ttc37
Tetratricopeptide repeat domain 37.
      
 0.566
LOC101074125
Vacuole membrane protein 1.
      
 0.497
trappc10
Trafficking protein particle complex 10.
      
 0.497
VMP1
Vacuole membrane protein 1.
      
 0.497
carnmt1
Carnosine N-methyltransferase 1.
      
 0.497
GARNL3
GTPase activating Rap/RanGAP domain like 3.
      
 0.497
rchy1
Ring finger and CHY zinc finger domain containing 1.
      
 0.412
tbrg1
Transforming growth factor beta regulator 1.
   
  
 0.407
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.