Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ei24EI24 autophagy associated transmembrane protein. (340 aa)    
Predicted Functional Partners:
TP53I3
Tumor protein p53 inducible protein 3.
     
 0.902
ttc37
Tetratricopeptide repeat domain 37.
      
 0.724
epg5
Ectopic P-granules autophagy protein 5 homolog (C. elegans).
      
 0.700
perp
P53 apoptosis effector related to pmp22.
      
 0.651
trappc10
Trafficking protein particle complex 10.
      
 0.560
LOC101074125
Vacuole membrane protein 1.
      
 0.520
VMP1
Vacuole membrane protein 1.
      
 0.520
tbrg1
Transforming growth factor beta regulator 1.
      
 0.518
atg101
Autophagy related 101.
      
 0.513
dcxr
Dicarbonyl/L-xylulose reductase.
      
 0.510
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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