Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
fblFibrillarin. (326 aa)    
Predicted Functional Partners:
nop58
NOP58 ribonucleoprotein homolog (yeast).
   
 0.999
nop56
NOP56 ribonucleoprotein homolog.
   
 0.999
Snu13
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.998
rrp9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 0.998
LOC101073954
Dyskeratosis congenita 1, dyskerin.
   
 0.997
gar1
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 0.995
rps16
Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
 
 
 0.993
LOC101062751
Nucleolar and coiled-body phosphoprotein 1.
   
 
 0.987
nat10
N-acetyltransferase 10.
   
 
 0.984
noc2l
NOC2-like nucleolar associated transcriptional repressor.
   
 
 0.983
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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