Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101072151Bloodthirsty-related gene family, member 12. (567 aa)    
Predicted Functional Partners:
LOC101071927
Rho guanine nucleotide exchange factor (GEF) 40.
      
 0.751
ikbke
Protein kinase domain-containing protein.
    
 0.649
LOC105418726
Zinc finger protein 219.
   
 0.629
igsf9b
Immunoglobulin superfamily member 9B.
    
 0.618
LOC101062709
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
     
 0.605
ZNF521
Zinc finger protein 521.
   
 0.590
irf5
IRF tryptophan pentad repeat domain-containing protein.
    
 0.567
il10
Interleukin 10.
      
 0.535
LOC101068355
Zgc:113337.
  
     0.508
ENSTRUP00000056463
Si:ch211-66e2.5.
  
 
  0.494
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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