STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101072151Bloodthirsty-related gene family, member 12. (567 aa)    
Predicted Functional Partners:
LOC101071927
Rho guanine nucleotide exchange factor (GEF) 40.
   
  
 0.727
ikbke
Protein kinase domain-containing protein.
    
 0.706
LOC101062709
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
     
 0.558
LOC105418726
Zinc finger protein 219.
   
 0.554
ZNF521
Zinc finger protein 521.
   
 0.542
igsf9b
Immunoglobulin superfamily member 9B.
    
 0.536
sema7a
Semaphorin 7A; Belongs to the semaphorin family.
      
 0.516
irf5
IRF tryptophan pentad repeat domain-containing protein.
   
 0.510
LOC101068355
Zgc:113337.
  
     0.508
ENSTRUP00000056463
Si:ch211-66e2.5.
  
 
  0.499
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (52%) [HD]