STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2SE12_TAKRUUncharacterized protein. (114 aa)    
Predicted Functional Partners:
kif22
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.596
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.593
sez6l2
Seizure related 6 homolog (mouse)-like 2.
    
 0.581
LOC101075733
Potassium channel tetramerization domain containing 13.
    
 
 0.560
LOC101063197
Protein yippee-like; Belongs to the yippee family.
      
 0.550
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
      
 0.542
pagr1
PAXIP1 associated glutamate-rich protein 1.
     
 0.539
LOC101066332
Glycerophosphodiester phosphodiesterase domain containing 3a.
      
 0.497
LOC101069823
Coronin; Belongs to the WD repeat coronin family.
    
 
 0.486
asphd2
Aspartate beta-hydroxylase domain containing 2.
      
 0.452
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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