mtnr1a protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

mtnr1a

Melatonin receptor 1A a; Belongs to the G-protein coupled receptor 1 family. (371 aa)

Predicted Functional Partners:

Fat2

0.808

fat3

0.717

tenm1

0.660

LOC101076921

0.563

LOC101071585

0.535

LOC101064665

0.528

dlg1-2

0.528

fastk

0.518

tectb

0.517

LOC101065059

0.514

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Fat2	LOC101065059	ENSTRUP00000070258	ENSTRUP00000029446	Uncharacterized protein.	Arylalkylamine N-acetyltransferase 2.	0.475
Fat2	mtnr1a	ENSTRUP00000070258	ENSTRUP00000010648	Uncharacterized protein.	Melatonin receptor 1A a; Belongs to the G-protein coupled receptor 1 family.	0.808
Fat2	tenm1	ENSTRUP00000070258	ENSTRUP00000060213	Uncharacterized protein.	Teneurin transmembrane protein 1.	0.577
LOC101064665	mtnr1a	ENSTRUP00000073670	ENSTRUP00000010648	Discs, large homolog 2 (Drosophila).	Melatonin receptor 1A a; Belongs to the G-protein coupled receptor 1 family.	0.528
LOC101064665	tenm1	ENSTRUP00000073670	ENSTRUP00000060213	Discs, large homolog 2 (Drosophila).	Teneurin transmembrane protein 1.	0.509
LOC101065059	Fat2	ENSTRUP00000029446	ENSTRUP00000070258	Arylalkylamine N-acetyltransferase 2.	Uncharacterized protein.	0.475
LOC101065059	mtnr1a	ENSTRUP00000029446	ENSTRUP00000010648	Arylalkylamine N-acetyltransferase 2.	Melatonin receptor 1A a; Belongs to the G-protein coupled receptor 1 family.	0.514
LOC101065059	tenm1	ENSTRUP00000029446	ENSTRUP00000060213	Arylalkylamine N-acetyltransferase 2.	Teneurin transmembrane protein 1.	0.445
LOC101071585	LOC101076921	ENSTRUP00000017327	ENSTRUP00000002810	Arrestin_C domain-containing protein.	Arrestin, beta 2a.	0.902
LOC101071585	mtnr1a	ENSTRUP00000017327	ENSTRUP00000010648	Arrestin_C domain-containing protein.	Melatonin receptor 1A a; Belongs to the G-protein coupled receptor 1 family.	0.535
LOC101076921	LOC101071585	ENSTRUP00000002810	ENSTRUP00000017327	Arrestin, beta 2a.	Arrestin_C domain-containing protein.	0.902
LOC101076921	fat3	ENSTRUP00000002810	ENSTRUP00000081250	Arrestin, beta 2a.	FAT atypical cadherin 3a.	0.433
LOC101076921	mtnr1a	ENSTRUP00000002810	ENSTRUP00000010648	Arrestin, beta 2a.	Melatonin receptor 1A a; Belongs to the G-protein coupled receptor 1 family.	0.563
dlg1-2	mtnr1a	ENSTRUP00000082804	ENSTRUP00000010648	Uncharacterized protein; Belongs to the MAGUK family.	Melatonin receptor 1A a; Belongs to the G-protein coupled receptor 1 family.	0.528
dlg1-2	tenm1	ENSTRUP00000082804	ENSTRUP00000060213	Uncharacterized protein; Belongs to the MAGUK family.	Teneurin transmembrane protein 1.	0.509
fastk	mtnr1a	ENSTRUP00000055872	ENSTRUP00000010648	Fas-activated serine/threonine kinase.	Melatonin receptor 1A a; Belongs to the G-protein coupled receptor 1 family.	0.518
fat3	LOC101076921	ENSTRUP00000081250	ENSTRUP00000002810	FAT atypical cadherin 3a.	Arrestin, beta 2a.	0.433
fat3	mtnr1a	ENSTRUP00000081250	ENSTRUP00000010648	FAT atypical cadherin 3a.	Melatonin receptor 1A a; Belongs to the G-protein coupled receptor 1 family.	0.717
mtnr1a	Fat2	ENSTRUP00000010648	ENSTRUP00000070258	Melatonin receptor 1A a; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.808
mtnr1a	LOC101064665	ENSTRUP00000010648	ENSTRUP00000073670	Melatonin receptor 1A a; Belongs to the G-protein coupled receptor 1 family.	Discs, large homolog 2 (Drosophila).	0.528