STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fgfr1op2FGFR1 oncogene partner 2. (224 aa)    
Predicted Functional Partners:
slmap
Sarcolemma associated protein.
    
 
 0.927
pdcd10
Programmed cell death 10b.
    
 
 0.924
LOC101078365
MOB family member 4, phocein.
    
 
 0.915
LOC101075138
Sarcolemma associated protein b.
    
 
 0.838
strip2
Striatin interacting protein 2.
    
 
 0.807
LOC101063238
Striatin interacting protein 1.
    
 
 0.807
STRN
Striatin.
    
 
 0.747
strn3
Striatin, calmodulin binding protein 3.
    
 
 0.747
H2TJH4_TAKRU
WD_REPEATS_REGION domain-containing protein.
    
 
 0.747
ppp2r1b
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.746
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.