STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haus3HAUS augmin-like complex, subunit 3. (635 aa)    
Predicted Functional Partners:
haus5
HAUS augmin-like complex, subunit 5.
   
 0.999
haus8
Si:ch211-153a8.4.
    
 0.998
haus7
HAUS augmin-like complex subunit 7 isoform X1.
   
 0.997
haus1
HAUS augmin-like complex, subunit 1.
   
 0.997
haus2
Uncharacterized protein.
   
 0.995
haus4
HAUS augmin-like complex, subunit 4.
   
 0.980
nedd1
NEDD1 gamma-tubulin ring complex targeting factor.
   
 0.963
rbm42
Uncharacterized protein.
   
 0.935
LOC101062470
Zinc finger protein 574.
    
 
 0.790
nadk
NAD kinase a.
    
 
 0.705
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (80%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.