STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrrtm1Leucine rich repeat transmembrane neuronal 1. (521 aa)    
Predicted Functional Partners:
clstn3
Calsyntenin 3.
   
  
 0.666
nrxn1
Neurexin 1b.
   
 0.585
LOC101078917
Uncharacterized protein.
   
 0.582
LOC101065004
Neurexin 2.
   
 0.582
LOC101079387
Neurexin 3b.
   
 0.582
nrxn3
Uncharacterized protein.
   
 0.582
ADGRL3
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.566
LOC105418305
Adhesion G protein-coupled receptor L3.1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.566
LOC105418305-2
Adhesion G protein-coupled receptor L3-like.
    
 
 0.566
LOC101070153
Si:ch1073-186i23.1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.562
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.