Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amotl2Angiomotin like 2b. (696 aa)    
Predicted Functional Partners:
nf2
Neurofibromin 2a (merlin).
    
 0.990
LOC101073618
Neurofibromin 2b (merlin).
    
 0.985
yap1
Yes-associated protein 1.
   
 0.979
Patj
InaD-like protein isoform X1.
   
 0.945
LOC101079837
Angiomotin.
    
0.937
lats2
Large tumor suppressor kinase 2.
   
 0.919
arhgap17
Uncharacterized protein.
    
 0.914
LOC101075514
Rho GTPase activating protein 17b.
    
 0.914
lats1
Large tumor suppressor kinase 1.
   
 0.912
Prkcz
PB1 domain-containing protein.
    
 0.903
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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