STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zfc3h1zf-C3H1 domain-containing protein. (2057 aa)    
Predicted Functional Partners:
mtrex
Mtr4 exosome RNA helicase.
    
 
 0.954
PAPOLG
Poly(A) polymerase gamma.
   
 
 0.943
skiv2l
SKI2 homolog, superkiller viralicidic activity 2-like.
    
 
 0.788
ipo7
Importin 7.
    
 
 0.766
ipo8
Importin 8.
    
 
 0.766
pnisr
PNN-interacting serine/arginine-rich protein.
   
    0.749
tspan8
Tetraspanin.
      
 0.707
tbc1d15
TBC1 domain family, member 15.
      
 0.707
sergef
Secretion regulating guanine nucleotide exchange factor.
      
 0.699
rbm27
RNA binding motif protein 27.
   
 
 0.694
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.