STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sec11aSignal peptidase complex catalytic subunit SEC11. (179 aa)    
Predicted Functional Partners:
ENSTRUP00000075769
Signal peptidase complex subunit 2.
   
 0.976
spcs3
Signal peptidase complex subunit 3.
   
 0.973
spcs1
Signal peptidase complex subunit 1.
   
 0.961
polr2g
Polymerase (RNA) II (DNA directed) polypeptide G-like.
 
 
    0.881
kptn
Kaptin (actin binding protein).
    
 0.802
depdc5
DEP domain containing 5.
    
 0.752
wdr24
WD repeat domain 24.
    
 0.722
wdr59
WD repeat domain 59.
    
 0.715
nprl2
NPR2 like, GATOR1 complex subunit.
   
 0.707
LOC101062378
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.696
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.