STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101078522Calcium binding and coiled-coil domain 1a. (650 aa)    
Predicted Functional Partners:
crlf3
Cytokine receptor-like factor 3.
      
 0.633
arnt2
Aryl-hydrocarbon receptor nuclear translocator 2.
    
   0.622
LOC101073418
Aryl hydrocarbon receptor nuclear translocator.
    
   0.622
phf5a
PHD finger protein 5A.
      
 0.584
ccpg1
Uncharacterized protein.
   
 0.561
LOC101061845
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.513
ENSTRUP00000083109
NACHT, LRR and PYD domains-containing protein 12-like.
  
 
  0.470
LOC101078637
Peptidylprolyl isomerase.
    
 
 0.455
wdr90
WD repeat domain 90.
   
 0.453
LOC101073244
Oxytocin receptor; Belongs to the G-protein coupled receptor 1 family. Vasopressin/oxytocin receptor subfamily.
     
 0.442
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (24%) [HD]