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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nptx1Uncharacterized protein. (422 aa)    
Predicted Functional Partners:
rnf2
Ring finger protein 2.
    
 0.736
ppp1r14c
Protein phosphatase 1, regulatory (inhibitor) subunit 14C.
   
    0.636
LOC101077870
Bicaudal C homolog 2.
      
 0.501
ENSTRUP00000052105
Transmembrane protein 130.
      
 0.501
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.444
cbfb
Core-binding factor subunit beta.
     
 0.440
tmem25
Ig-like domain-containing protein.
   
  
 0.438
bmi1
Bmi1 polycomb ring finger oncogene 1a.
    
 0.437
commd3
COMM domain containing 3.
    
 0.437
pcgf1
Polycomb group ring finger 1.
    
 0.437
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.