Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nptx1Uncharacterized protein. (422 aa)    
Predicted Functional Partners:
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
 
 0.761
ENSTRUP00000052105
Transmembrane protein 130.
   
  
 0.727
LOC101077870
Bicaudal C homolog 2.
      
 0.720
LOC101074851
Neuronal pentraxin receptor a.
   
 
 0.700
rnf2
Ring finger protein 2.
    
 0.641
opa1
OPA1 mitochondrial dynamin like GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
   0.624
nit2
Nitrilase family, member 2.
    
 
 0.575
bicc1
BicC family RNA binding protein 1a.
      
 0.556
tmem25
Ig-like domain-containing protein.
   
  
 0.551
gba
Glucosylceramidase.
   
  
 0.523
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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