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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101078161Glutamine amidotransferase like class 1 domain containing 1. (252 aa)    
Predicted Functional Partners:
ppp1r21
Protein phosphatase 1, regulatory subunit 21.
    
   0.846
TPM4
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.618
LOC101070032
Uncharacterized protein.
   
 0.618
TPM1
Tropomyoshin1-1; Belongs to the tropomyosin family.
   
 0.618
tpm4
Tropomyosin4-2; Belongs to the tropomyosin family.
   
 0.618
LOC101072712
Myocardial zonula adherens protein.
   
 0.618
TPM3
Tropomyosin3; Belongs to the tropomyosin family.
   
 0.618
tpm1-2
Skeletal muscle tropomyosin1-2; Belongs to the tropomyosin family.
   
 0.618
tpm2
Tropomyosin2; Belongs to the tropomyosin family.
   
 0.618
tnni1
Troponin I type 1a (skeletal, slow).
   
 0.606
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.