STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2SFL4_TAKRUHSR domain-containing protein. (347 aa)    
Predicted Functional Partners:
LOC101074167
WD_REPEATS_REGION domain-containing protein.
   
 0.783
rbbp4
Retinoblastoma binding protein 4.
   
 0.783
mta3
Metastasis-associated protein MTA3 isoform X1.
   
 0.742
mta1
Metastasis associated 1.
   
 0.742
mta2
Metastasis associated 1 family, member 2.
   
 0.742
gatad2b
GATA zinc finger domain containing 2B.
   
 0.740
LOC101062652
Uncharacterized protein.
   
 0.740
gatad2a
GATA zinc finger domain containing 2Ab.
   
 0.740
LOC101080044
Methyl-CpG binding domain protein 2.
    
 0.733
LOC101063908
Methyl-CpG binding domain protein 3a.
    
 0.733
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.