Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101079095Bone morphogenetic protein/retinoic acid inducible neural-specific 3a, tandem duplicate 1. (770 aa)    
Predicted Functional Partners:
LOC101078868
Bone morphogenetic protein/retinoic acid inducible neural-specific 3a, tandem duplicate 2.
   
   0.982
LOC101066208
Ig-like domain-containing protein.
   
  
 0.811
tbx4
T-box transcription factor 4.
      
 0.704
lrpap1
Low density lipoprotein receptor-related protein associated protein 1.
      
 0.698
cdh12
Cadherin 12, type 2a (N-cadherin 2); Cadherins are calcium-dependent cell adhesion proteins.
      
 0.639
apmap
Adipocyte plasma membrane associated protein.
      
 0.577
CDH6
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
  
  
 0.572
nxph2
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
  
 0.568
LOC101074094
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
  
 0.563
LOC101074094-2
Neurexophilin-1-like.
  
  
 0.563
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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