Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101079604Tetraspanin. (260 aa)    
Predicted Functional Partners:
abcg8
ATP-binding cassette, sub-family G (WHITE), member 8.
    
   0.641
gadd45gip1
Growth arrest and DNA-damage-inducible, gamma interacting protein 1.
      
 0.623
apoe1
Uncharacterized protein.
      
 0.581
apoe2
Apolipoprotein E2.
      
 0.581
rcn2
Reticulocalbin 2.
   
  
 0.543
tm7sf3
Transmembrane 7 superfamily member 3.
      
 0.504
LOC101076598
Tetraspanin.
    
 
 0.498
LOC101079339
CD9 antigen-like.
    
 
 0.498
phf21a
PHD finger protein 21Ab.
      
 0.438
igsf8
Immunoglobulin superfamily, member 8.
    
 
 0.429
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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