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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101079321Regulator of G protein signaling 8. (174 aa)    
Predicted Functional Partners:
ncdn
Neurochondrin.
      
 0.720
LOC101066066
Guanine nucleotide-binding protein subunit alpha-14.
    
 0.621
LOC101064679
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.621
LOC101066291
Uncharacterized protein.
    
 0.621
LOC101063826
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.621
rgs18
Regulator of G protein signaling 18.
  
  
 
0.599
LOC101075850
Regulator of G protein signaling 5a.
  
  
 
0.592
ppl
Periplakin.
   
  
 0.579
LOC101061293
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.
   
 0.575
LOC101079922
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.
   
 0.574
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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