STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SV2ASynaptic vesicle glycoprotein 2A. (736 aa)    
Predicted Functional Partners:
LOC101079112
Laminin IV type A domain-containing protein.
     
 0.695
LOC101061410
Laminin N-terminal domain-containing protein.
     
 0.695
lamb3
Uncharacterized protein.
     
 0.684
LOC101062763
Uncharacterized protein.
     
 0.668
LOC101074108
Laminin, beta 2 (laminin S).
     
 0.668
LOC101075179
Laminin, beta 1b.
     
 0.660
LAMA2
Laminin subunit alpha 2.
     
 0.659
LOC101062982
Uncharacterized protein.
     
  0.650
ints9
Integrator complex subunit 9.
    
 0.526
ints1
Integrator complex subunit 1.
    
 0.517
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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