fit to screen
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101062877ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a. (833 aa)    
Predicted Functional Partners:
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
   
 
 0.642
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
   
 
 0.642
ube2j2
Ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast).
      
 0.521
casp9
Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
    
 0.519
agfg1
ArfGAP with FG repeats 1b.
      
 0.490
rab35
RAB35, member RAS oncogene family b.
    
 
 0.472
LOC101066302
Si:dkey-16l2.16.
    
 
 0.472
ints11
Integrator complex subunit 11.
   
  
 0.451
ENSTRUP00000047861
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.404
LOC101068809
ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family.
    
 0.404
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (26%) [HD]