STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101073355DnaJ (Hsp40) homolog, subfamily C, member 5aa. (199 aa)    
Predicted Functional Partners:
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.737
hspa14
Heat shock protein 14; Belongs to the heat shock protein 70 family.
 
 0.707
LOC101069079
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
  
 0.701
LOC101075813
Heat shock cognate 70; Belongs to the heat shock protein 70 family.
 
 0.697
ENSTRUP00000050889
Heat shock 70 kDa protein 1-like.
 
 0.696
ENSTRUP00000051043
Heat shock 70kDa protein 1/2/6/8.
 
 0.693
LOC101071708
Uncharacterized protein.
 
 0.692
ENSTRUP00000005947
annotation not available
 
 0.692
H2RTR4_TAKRU
Uncharacterized protein.
 
 0.691
HSPA2
Si:ch211-199o1.2; Belongs to the heat shock protein 70 family.
 
 0.688
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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