STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gas2l3Growth arrest-specific 2 like 3. (663 aa)    
Predicted Functional Partners:
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
  0.574
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.532
LOC101077791
Uncharacterized protein.
   
 
 0.521
LOC115249813
Titin-cap (telethonin).
   
 
 0.436
arhgap1
Rho GTPase activating protein 1.
     
 0.421
MYOZ1
Myozenin 1.
   
 
 0.417
TPM4
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.417
LOC101070032
Uncharacterized protein.
   
 0.417
TPM1
Tropomyoshin1-1; Belongs to the tropomyosin family.
   
 0.417
tpm4
Tropomyosin4-2; Belongs to the tropomyosin family.
   
 0.417
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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