Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
slc2a4rgSi:rp71-79p20.2. (538 aa)    
Predicted Functional Partners:
suds3
SDS3 homolog, SIN3A corepressor complex component.
    
   0.729
sap130
Sin3A-associated protein a.
    
   0.642
LOC101068931
BRMS1 like transcriptional repressor b.
    
   0.642
sap30l
Sap30-like.
    
 
 0.635
LOC101076576
BRMS1 transcriptional repressor and anoikis regulator.
    
   0.624
pbld
Phenazine biosynthesis like protein domain containing.
      
 0.601
mlc1
Modulator of VRAC current 1.
      
 0.582
brms1l
Uncharacterized protein.
    
   0.525
Rft1
Oligosaccharide translocation protein RFT1.
      
 0.477
cwc27
CWC27 spliceosome associated cyclophilin.
      
 0.475
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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