LOC101067570 protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC101067570

Si:ch73-91k6.2. (415 aa)

Predicted Functional Partners:

fut8

0.935

mgat3

0.928

man2a2

0.925

mgat4a

0.919

mgat4b

0.919

LOC101062586

0.913

Mgat2

0.902

ENSTRUP00000075246

0.470

LOC101076647

0.434

LOC101073419

0.434

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTRUP00000075246	LOC101067570	ENSTRUP00000075246	ENSTRUP00000011618	annotation not available	Si:ch73-91k6.2.	0.470
ENSTRUP00000075246	LOC101073419	ENSTRUP00000075246	ENSTRUP00000058621	annotation not available	Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b.	0.632
ENSTRUP00000075246	Mgat2	ENSTRUP00000075246	ENSTRUP00000052638	annotation not available	Mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase.	0.438
ENSTRUP00000075246	fut8	ENSTRUP00000075246	ENSTRUP00000052413	annotation not available	Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.	0.609
LOC101062586	LOC101067570	ENSTRUP00000020721	ENSTRUP00000011618	Uncharacterized protein.	Si:ch73-91k6.2.	0.913
LOC101062586	Mgat2	ENSTRUP00000020721	ENSTRUP00000052638	Uncharacterized protein.	Mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase.	0.913
LOC101062586	fut8	ENSTRUP00000020721	ENSTRUP00000052413	Uncharacterized protein.	Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.	0.925
LOC101062586	mgat3	ENSTRUP00000020721	ENSTRUP00000000073	Uncharacterized protein.	Mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase b.	0.910
LOC101062586	mgat4a	ENSTRUP00000020721	ENSTRUP00000054616	Uncharacterized protein.	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A.	0.903
LOC101062586	mgat4b	ENSTRUP00000020721	ENSTRUP00000067049	Uncharacterized protein.	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B.	0.903
LOC101067570	ENSTRUP00000075246	ENSTRUP00000011618	ENSTRUP00000075246	Si:ch73-91k6.2.	annotation not available	0.470
LOC101067570	LOC101062586	ENSTRUP00000011618	ENSTRUP00000020721	Si:ch73-91k6.2.	Uncharacterized protein.	0.913
LOC101067570	LOC101073419	ENSTRUP00000011618	ENSTRUP00000058621	Si:ch73-91k6.2.	Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b.	0.434
LOC101067570	LOC101076647	ENSTRUP00000011618	ENSTRUP00000012752	Si:ch73-91k6.2.	Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a.	0.434
LOC101067570	Mgat2	ENSTRUP00000011618	ENSTRUP00000052638	Si:ch73-91k6.2.	Mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase.	0.902
LOC101067570	fut8	ENSTRUP00000011618	ENSTRUP00000052413	Si:ch73-91k6.2.	Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.	0.935
LOC101067570	man2a2	ENSTRUP00000011618	ENSTRUP00000075658	Si:ch73-91k6.2.	Alpha-mannosidase.	0.925
LOC101067570	mgat3	ENSTRUP00000011618	ENSTRUP00000000073	Si:ch73-91k6.2.	Mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase b.	0.928
LOC101067570	mgat4a	ENSTRUP00000011618	ENSTRUP00000054616	Si:ch73-91k6.2.	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A.	0.919
LOC101067570	mgat4b	ENSTRUP00000011618	ENSTRUP00000067049	Si:ch73-91k6.2.	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B.	0.919