fit to screen
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2SGY1_TAKRUPDZ domain-containing protein. (1988 aa)    
Predicted Functional Partners:
GRID1
Glutamate receptor, ionotropic, delta 1b.
   
 0.684
LOC101064905
Glutamate receptor ionotropic, delta-1-like isoform X1.
   
 0.684
grid2
Glutamate receptor, ionotropic, delta 2.
   
 0.684
LOC101065208
Usher syndrome 1C.
      
 0.606
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.575
ccdc85b
Coiled-coil domain containing 85B.
      
 0.569
LOC101075853
Collectin sub-family member 12.
    
 0.534
ift88
Intraflagellar transport 88 homolog.
    
 0.525
plek2
Pleckstrin 2.
    
 
 0.516
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.501
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (12%) [HD]