STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wsb1WD repeat and SOCS box-containing protein 1; Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. (427 aa)    
Predicted Functional Partners:
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
   
 0.884
LOC101074738
Retinoblastoma binding protein 5.
   
0.883
LOC101070909
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
    
 0.784
LOC101071878
SET domain containing 1A, histone lysine methyltransferase.
   
 0.774
ENSTRUP00000082248
Histone-lysine N-methyltransferase SETD1B-A-like isoform X1.
   
 0.774
hcfc2
Host cell factor C2.
   
 0.768
LOC101079994
Host cell factor C1a.
   
 0.768
cul5
Cullin 5a; Belongs to the cullin family.
    
 0.755
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
   
 0.745
LOC101068512
KAT8 regulatory NSL complex subunit 1a.
    
 0.742
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.