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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
usp37Ubiquitin carboxyl-terminal hydrolase. (714 aa)    
Predicted Functional Partners:
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
    
 0.700
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
    
 0.700
LOC101062380
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
    
 0.669
rps27a
Ribosomal protein S27a.
    
 0.644
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.617
LOC101067852
Uncharacterized protein.
    
 0.613
LOC101080066
Androgen receptor.
    
 0.613
wdr48
WD repeat domain 48b.
   
 
 0.573
etf1
Eukaryotic translation termination factor 1b.
      
 0.566
LOC101071812
Si:ch211-11n16.2.
   
 0.560
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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