STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nek4NIMA-related kinase 4. (864 aa)    
Predicted Functional Partners:
nek7
NIMA-related kinase 7.
  
 
0.653
rpgrip1l
RPGRIP1 like.
   
 
 0.621
cmc2
COX assembly mitochondrial protein.
      
 0.566
nek1
NIMA-related kinase 1.
 
    
 0.552
plk3
Serine/threonine-protein kinase PLK.
   
0.476
plk4
Polo-like kinase 4 (Drosophila).
   
0.466
H2RLT0_TAKRU
Tetratricopeptide repeat domain 21B.
    
 
 0.430
ENSTRUP00000077170
annotation not available
    
 
 0.430
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 
 0.417
spata7
Uncharacterized protein.
   
 
 0.408
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.