Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101069608 | barx1 | ENSTRUP00000053630 | ENSTRUP00000011839 | Bone morphogenetic protein 16. | BARX homeobox 1. | 0.425 |
LOC101079976 | barx1 | ENSTRUP00000013758 | ENSTRUP00000011839 | ISL LIM homeobox 2b. | BARX homeobox 1. | 0.425 |
SYDE1 | barx1 | ENSTRUP00000065808 | ENSTRUP00000011839 | Synapse defective Rho GTPase homolog 1. | BARX homeobox 1. | 0.495 |
barx1 | LOC101069608 | ENSTRUP00000011839 | ENSTRUP00000053630 | BARX homeobox 1. | Bone morphogenetic protein 16. | 0.425 |
barx1 | LOC101079976 | ENSTRUP00000011839 | ENSTRUP00000013758 | BARX homeobox 1. | ISL LIM homeobox 2b. | 0.425 |
barx1 | SYDE1 | ENSTRUP00000011839 | ENSTRUP00000065808 | BARX homeobox 1. | Synapse defective Rho GTPase homolog 1. | 0.495 |
barx1 | chm | ENSTRUP00000011839 | ENSTRUP00000062317 | BARX homeobox 1. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.568 |
barx1 | ercc4 | ENSTRUP00000011839 | ENSTRUP00000047910 | BARX homeobox 1. | Excision repair cross-complementation group 4. | 0.482 |
barx1 | msx1 | ENSTRUP00000011839 | ENSTRUP00000041027 | BARX homeobox 1. | Homeobox domain-containing protein. | 0.443 |
barx1 | nkx3-2 | ENSTRUP00000011839 | ENSTRUP00000036923 | BARX homeobox 1. | NK3 homeobox 2. | 0.522 |
barx1 | prdm16 | ENSTRUP00000011839 | ENSTRUP00000037754 | BARX homeobox 1. | Si:ch211-263k4.2. | 0.468 |
barx1 | prdm5 | ENSTRUP00000011839 | ENSTRUP00000084107 | BARX homeobox 1. | Zinc finger protein. | 0.465 |
barx1 | sfrp2 | ENSTRUP00000011839 | ENSTRUP00000061037 | BARX homeobox 1. | Secreted frizzled-related protein 2. | 0.483 |
chm | barx1 | ENSTRUP00000062317 | ENSTRUP00000011839 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | BARX homeobox 1. | 0.568 |
ercc4 | barx1 | ENSTRUP00000047910 | ENSTRUP00000011839 | Excision repair cross-complementation group 4. | BARX homeobox 1. | 0.482 |
msx1 | barx1 | ENSTRUP00000041027 | ENSTRUP00000011839 | Homeobox domain-containing protein. | BARX homeobox 1. | 0.443 |
nkx3-2 | barx1 | ENSTRUP00000036923 | ENSTRUP00000011839 | NK3 homeobox 2. | BARX homeobox 1. | 0.522 |
prdm16 | barx1 | ENSTRUP00000037754 | ENSTRUP00000011839 | Si:ch211-263k4.2. | BARX homeobox 1. | 0.468 |
prdm5 | barx1 | ENSTRUP00000084107 | ENSTRUP00000011839 | Zinc finger protein. | BARX homeobox 1. | 0.465 |
sfrp2 | barx1 | ENSTRUP00000061037 | ENSTRUP00000011839 | Secreted frizzled-related protein 2. | BARX homeobox 1. | 0.483 |