Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
barx1BARX homeobox 1. (234 aa)    
Predicted Functional Partners:
LOC101071242
Interleukin 10 receptor, beta.
    
 
 0.593
chm
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
      
 0.589
pax9
Paired box 9.
      
 0.575
fgf8
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.551
SYDE1
Synapse defective Rho GTPase homolog 1.
      
 0.548
isl1
ISL LIM homeobox 1.
    
 0.547
tbx22
T-box transcription factor 22.
   
 
 0.540
mks1
MKS transition zone complex subunit 1.
     
  0.534
tctn3
DUF1619 domain-containing protein.
     
  0.534
tctn2
Tectonic family member 2.
     
  0.534
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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