Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
sh3rf3SH3 domain containing ring finger 3. (836 aa)    
Predicted Functional Partners:
uxs1
UDP-glucuronate decarboxylase 1.
   
  
 0.894
sptlc1
Serine palmitoyltransferase, long chain base subunit 1.
    
 
 0.817
sorl1
Fibronectin type-III domain-containing protein.
   
 0.762
asmtl
Acetylserotonin O-methyltransferase-like.
   
  
 0.722
rps27a
Ribosomal protein S27a.
    
  0.678
zhx3
Zinc fingers and homeoboxes 3.
    
 0.664
akap17a
A kinase (PRKA) anchor protein 17A.
    
 
 0.655
prdm4
PR domain containing 4.
   
 0.646
LOC101067663
Uncharacterized protein.
   
 0.646
prdm5
Zinc finger protein.
   
 0.646
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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