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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101076459ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited). (1819 aa)    
Predicted Functional Partners:
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.853
ENSTRUP00000060777
annotation not available
   
 
 0.565
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
   
 
 0.565
LOC101079283
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
   0.561
ENSTRUP00000047861
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.531
LOC101068809
ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family.
   
 0.531
arl15
ADP-ribosylation factor-like 15a.
   
 0.487
mon2
MON2 homolog, regulator of endosome-to-Golgi trafficking.
   
 
0.485
cse1l
CSE1 chromosome segregation 1-like (yeast).
 
  
 
 0.448
copg2
Coatomer subunit gamma-2; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).
   
 
 0.437
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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