STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2SI73_TAKRUZnMc domain-containing protein. (578 aa)    
Predicted Functional Partners:
timp-2b
NTR domain-containing protein.
   
 0.674
timp2
Tissue inhibitor of metalloproteinase 2a.
   
 0.674
timp3
NTR domain-containing protein.
   
 0.656
LOC101061607
Matrix metallopeptidase 14b (membrane-inserted).
  
0.564
plg
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.547
LOC101063377
Decorin; May affect the rate of fibrils formation.
   
 0.547
LOC101071448
Matrix metallopeptidase 15b.
   
0.521
cd44
Link domain-containing protein.
   
 0.511
timp4
TIMP metallopeptidase inhibitor 4, tandem duplicate 2.
    
 0.497
LOC101079398
Matrix metallopeptidase 11a.
  
0.485
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.