STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101076667Major facilitator superfamily domain containing 2B. (610 aa)    
Predicted Functional Partners:
pcmt1
Protein-L-isoaspartate (D-aspartate) O-methyltransferase.
      
 0.608
mfsd11
Major facilitator superfamily domain containing 11.
      
 0.547
LOC101061250
Protein-L-isoaspartate O-methyltransferase.
      
 0.547
tyms
Thymidylate synthetase.
    
  0.541
tk1
Thymidine kinase.
     
  0.527
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
  0.520
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.519
sass6
SAS-6 centriolar assembly protein.
      
 0.511
LOC101066033
Occludin a.
      
 0.510
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.464
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.