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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101076667Major facilitator superfamily domain containing 2B. (610 aa)    
Predicted Functional Partners:
tyms
Thymidylate synthetase.
    
  0.618
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
  0.583
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.541
mfsd11
Major facilitator superfamily domain containing 11.
      
 0.528
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.497
svop
SV2 related protein a.
      
 0.485
pudp
Pseudouridine 5'-phosphatase.
  
  
 0.470
xylb
Xylulokinase homolog (H. influenzae).
  
  
 0.442
mfsd5
Molybdate-anion transporter; Mediates high-affinity intracellular uptake of the rare oligo-element molybdenum; Belongs to the major facilitator superfamily.
   
  
 0.441
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.438
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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