Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
slc25a40Solute carrier family 25 member 40; Belongs to the mitochondrial carrier (TC 2.A.29) family. (346 aa)    
Predicted Functional Partners:
rundc3b
RUN domain containing 3b.
      
 0.915
crot
Carnitine O-octanoyltransferase.
      
 0.730
adam22
ADAM metallopeptidase domain 22.
      
 0.585
pum1
Pumilio RNA-binding family member 1.
    
   0.534
pum2
Pumilio RNA-binding family member 2.
    
   0.534
Dmtf1
Cyclin D binding myb-like transcription factor 1.
      
 0.518
cnot4
CCR4-NOT transcription complex, subunit 4a.
      
 0.514
abcb7
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
      
 0.499
ENSTRUP00000084153
annotation not available
      
 0.490
cmc1
COX assembly mitochondrial protein.
      
 0.459
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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