STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
znf276Zinc finger protein 276. (577 aa)    
Predicted Functional Partners:
naif1
Nuclear apoptosis inducing factor 1.
      
 0.780
dclre1b
DNA cross-link repair 1B.
    
 
 0.749
SRBD1
S1 RNA binding domain 1.
    
 
 0.716
def8
Differentially expressed in FDCP 8 homolog.
      
 0.703
vps9d1
VPS9 domain containing 1.
      
 0.699
CCNK
Cyclin K; Belongs to the cyclin family.
    
 0.684
ccnl1
Cyclin L1a; Belongs to the cyclin family.
   
  
 0.677
samd11
Sterile alpha motif domain containing 11.
    
 
 0.639
zbtb8a
Zinc finger and BTB domain containing 8A.
    
   0.627
ccnq
Cyclin Q; Belongs to the cyclin family.
    
 0.551
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.