STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgef6Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6. (729 aa)    
Predicted Functional Partners:
LOC101077791
Uncharacterized protein.
   
 
0.856
pak1
Non-specific serine/threonine protein kinase.
    
 0.785
PAK3
Non-specific serine/threonine protein kinase.
    
 0.785
LOC101067321
G protein-coupled receptor kinase interacting ArfGAP 2b.
    
 0.758
PAK2
Non-specific serine/threonine protein kinase.
    
 0.758
pak2
Non-specific serine/threonine protein kinase.
    
 0.758
git2
G protein-coupled receptor kinase interacting ArfGAP 2a.
    
 0.758
git1
G protein-coupled receptor kinase interacting ArfGAP 1.
    
 0.758
LOC101075233
Parvin, alpha a.
   
 0.684
LOC101073733
Uncharacterized protein.
   
 0.671
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.