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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mbtps2Membrane-bound transcription factor peptidase, site 2. (529 aa)    
Predicted Functional Partners:
LOC101078409
Sorting and assembly machinery component 50 homolog, like.
  
  
 0.959
dhdds
Alkyl transferase; Belongs to the UPP synthase family.
  
  
 0.794
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
  
  
 0.794
srebf1
Sterol regulatory element binding transcription factor 1.
    
 0.768
srebf2
Sterol regulatory element binding transcription factor 2.
    
 0.768
atf6
Activating transcription factor 6.
     
 0.762
LOC101073153
BZIP domain-containing protein.
     
 0.762
creb3l1
cAMP responsive element binding protein 3-like 1.
     
 0.744
LOC101071379
MYCN proto-oncogene, bHLH transcription factor.
    
 0.725
LOC101065014
cAMP responsive element binding protein 3-like 3a.
     
 0.722
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.