Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101061607 | fbxo25 | ENSTRUP00000062505 | ENSTRUP00000085823 | Matrix metallopeptidase 14b (membrane-inserted). | F-box protein 25. | 0.755 |
LOC101061607 | fbxo32 | ENSTRUP00000062505 | ENSTRUP00000012274 | Matrix metallopeptidase 14b (membrane-inserted). | F-box protein 32. | 0.573 |
UBA3 | cacul1 | ENSTRUP00000031292 | ENSTRUP00000046055 | Ubiquitin like modifier activating enzyme 3. | Cullin domain-containing protein; Belongs to the cullin family. | 0.832 |
UBA3 | cand1 | ENSTRUP00000031292 | ENSTRUP00000014446 | Ubiquitin like modifier activating enzyme 3. | Cullin-associated and neddylation-dissociated 1. | 0.575 |
UBA3 | cul3 | ENSTRUP00000031292 | ENSTRUP00000024763 | Ubiquitin like modifier activating enzyme 3. | Cullin 3a; Belongs to the cullin family. | 0.884 |
UBA3 | fbxo25 | ENSTRUP00000031292 | ENSTRUP00000085823 | Ubiquitin like modifier activating enzyme 3. | F-box protein 25. | 0.586 |
UBA3 | fbxo32 | ENSTRUP00000031292 | ENSTRUP00000012274 | Ubiquitin like modifier activating enzyme 3. | F-box protein 32. | 0.586 |
UBA3 | nae1 | ENSTRUP00000031292 | ENSTRUP00000087871 | Ubiquitin like modifier activating enzyme 3. | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily. | 0.999 |
UBA3 | skp1 | ENSTRUP00000031292 | ENSTRUP00000019939 | Ubiquitin like modifier activating enzyme 3. | S-phase kinase-associated protein 1; Belongs to the SKP1 family. | 0.835 |
UBA3 | skp2 | ENSTRUP00000031292 | ENSTRUP00000055409 | Ubiquitin like modifier activating enzyme 3. | S-phase kinase-associated protein 2, E3 ubiquitin protein ligase. | 0.747 |
acss3 | fbxo32 | ENSTRUP00000061598 | ENSTRUP00000012274 | Acyl-CoA synthetase short chain family member 3. | F-box protein 32. | 0.707 |
cacul1 | UBA3 | ENSTRUP00000046055 | ENSTRUP00000031292 | Cullin domain-containing protein; Belongs to the cullin family. | Ubiquitin like modifier activating enzyme 3. | 0.832 |
cacul1 | cand1 | ENSTRUP00000046055 | ENSTRUP00000014446 | Cullin domain-containing protein; Belongs to the cullin family. | Cullin-associated and neddylation-dissociated 1. | 0.970 |
cacul1 | fbxo25 | ENSTRUP00000046055 | ENSTRUP00000085823 | Cullin domain-containing protein; Belongs to the cullin family. | F-box protein 25. | 0.656 |
cacul1 | fbxo32 | ENSTRUP00000046055 | ENSTRUP00000012274 | Cullin domain-containing protein; Belongs to the cullin family. | F-box protein 32. | 0.656 |
cacul1 | nae1 | ENSTRUP00000046055 | ENSTRUP00000087871 | Cullin domain-containing protein; Belongs to the cullin family. | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily. | 0.796 |
cacul1 | skp1 | ENSTRUP00000046055 | ENSTRUP00000019939 | Cullin domain-containing protein; Belongs to the cullin family. | S-phase kinase-associated protein 1; Belongs to the SKP1 family. | 0.971 |
cacul1 | skp2 | ENSTRUP00000046055 | ENSTRUP00000055409 | Cullin domain-containing protein; Belongs to the cullin family. | S-phase kinase-associated protein 2, E3 ubiquitin protein ligase. | 0.932 |
cand1 | UBA3 | ENSTRUP00000014446 | ENSTRUP00000031292 | Cullin-associated and neddylation-dissociated 1. | Ubiquitin like modifier activating enzyme 3. | 0.575 |
cand1 | cacul1 | ENSTRUP00000014446 | ENSTRUP00000046055 | Cullin-associated and neddylation-dissociated 1. | Cullin domain-containing protein; Belongs to the cullin family. | 0.970 |
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