STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NPC1L1SSD domain-containing protein. (1353 aa)    
Predicted Functional Partners:
npc2
Niemann-Pick disease, type C2.
   
 0.931
srebf1
Sterol regulatory element binding transcription factor 1.
    
 0.836
srebf2
Sterol regulatory element binding transcription factor 2.
    
 0.836
abcg5
ATP-binding cassette, sub-family G (WHITE), member 5.
   
 
 0.680
insig2
Insulin-induced gene protein; Mediates feedback control of cholesterol synthesis. Belongs to the INSIG family.
    
 0.648
insig1
Insulin-induced gene protein; Mediates feedback control of cholesterol synthesis.
    
 0.648
abcg8
ATP-binding cassette, sub-family G (WHITE), member 8.
   
 
 0.647
LOC101071379
MYCN proto-oncogene, bHLH transcription factor.
    
 0.637
mbtps1
Membrane-bound transcription factor peptidase, site 1.
   
 
 0.635
LOC101065380
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.545
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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