STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snx25Sorting nexin 25. (975 aa)    
Predicted Functional Partners:
mdm1
Nuclear protein MDM1 isoform X1.
      
 0.497
H2S785_TAKRU
Sorting nexin 20.
      
 0.468
LOC101077573
Sorting nexin 14.
   
 
0.466
SNX14
Sorting nexin 14.
   
 
0.466
dcxr
Dicarbonyl/L-xylulose reductase.
      
 0.433
LOC101080010
Ras-related protein Rab-33A.
     
 0.413
pms1
PMS1 homolog 1, mismatch repair system component.
   
  
 0.409
snx17
Sorting nexin 17.
      
 0.404
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.