STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ogfrl1Opioid growth factor receptor-like 1. (349 aa)    
Predicted Functional Partners:
penk
Proenkephalin a.
     
 0.963
H2S082_TAKRU
Prepronociceptin b.
     
 0.901
LOC101074721
Prepronociceptin a.
     
 0.901
LOC101064982
Proopiomelanocortin.
     
  0.900
pdyn
Prodynorphin.
     
  0.900
LOC101072941
Uncharacterized protein.
     
  0.900
ivns1abp
Influenza virus NS1A binding protein a.
      
 0.711
LOC101069099
Guanine nucleotide binding protein (G protein), beta polypeptide 3b.
     
  0.650
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
     
  0.650
gng3
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
     
  0.650
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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