tbr1 protein (Takifugu rubripes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

tbr1

T-box brain transcription factor 1b. (677 aa)

Predicted Functional Partners:

egr3

0.676

Plagl2

0.631

enc1

0.604

zic1

0.591

satb2

0.574

fezf2

0.554

neurod6

0.551

osbpl7

0.547

egr2

0.546

srgap2

0.546

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Plagl2	enc1	ENSTRUP00000058532	ENSTRUP00000047383	Pleiomorphic adenoma gene-like 2.	Ectodermal-neural cortex 1.	0.565
Plagl2	tbr1	ENSTRUP00000058532	ENSTRUP00000012433	Pleiomorphic adenoma gene-like 2.	T-box brain transcription factor 1b.	0.631
Plagl2	zic1	ENSTRUP00000058532	ENSTRUP00000045520	Pleiomorphic adenoma gene-like 2.	Zic family member 1 (odd-paired homolog, Drosophila).	0.403
egr2	egr3	ENSTRUP00000001567	ENSTRUP00000004923	Early growth response 2b.	Early growth response 3.	0.970
egr2	tbr1	ENSTRUP00000001567	ENSTRUP00000012433	Early growth response 2b.	T-box brain transcription factor 1b.	0.546
egr3	egr2	ENSTRUP00000004923	ENSTRUP00000001567	Early growth response 3.	Early growth response 2b.	0.970
egr3	tbr1	ENSTRUP00000004923	ENSTRUP00000012433	Early growth response 3.	T-box brain transcription factor 1b.	0.676
enc1	Plagl2	ENSTRUP00000047383	ENSTRUP00000058532	Ectodermal-neural cortex 1.	Pleiomorphic adenoma gene-like 2.	0.565
enc1	tbr1	ENSTRUP00000047383	ENSTRUP00000012433	Ectodermal-neural cortex 1.	T-box brain transcription factor 1b.	0.604
enc1	zic1	ENSTRUP00000047383	ENSTRUP00000045520	Ectodermal-neural cortex 1.	Zic family member 1 (odd-paired homolog, Drosophila).	0.682
fezf2	satb2	ENSTRUP00000000906	ENSTRUP00000039323	FEZ family zinc finger 2.	DNA-binding protein SATB.	0.620
fezf2	tbr1	ENSTRUP00000000906	ENSTRUP00000012433	FEZ family zinc finger 2.	T-box brain transcription factor 1b.	0.554
neurod6	satb2	ENSTRUP00000076958	ENSTRUP00000039323	Neurogenic differentiation factor 6.	DNA-binding protein SATB.	0.475
neurod6	tbr1	ENSTRUP00000076958	ENSTRUP00000012433	Neurogenic differentiation factor 6.	T-box brain transcription factor 1b.	0.551
osbpl7	tbr1	ENSTRUP00000031880	ENSTRUP00000012433	Oxysterol-binding protein; Belongs to the OSBP family.	T-box brain transcription factor 1b.	0.547
satb2	fezf2	ENSTRUP00000039323	ENSTRUP00000000906	DNA-binding protein SATB.	FEZ family zinc finger 2.	0.620
satb2	neurod6	ENSTRUP00000039323	ENSTRUP00000076958	DNA-binding protein SATB.	Neurogenic differentiation factor 6.	0.475
satb2	tbr1	ENSTRUP00000039323	ENSTRUP00000012433	DNA-binding protein SATB.	T-box brain transcription factor 1b.	0.574
srgap2	tbr1	ENSTRUP00000081206	ENSTRUP00000012433	SLIT-ROBO Rho GTPase activating protein 2.	T-box brain transcription factor 1b.	0.546
tbr1	Plagl2	ENSTRUP00000012433	ENSTRUP00000058532	T-box brain transcription factor 1b.	Pleiomorphic adenoma gene-like 2.	0.631